Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COL11A1P12107 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.1■□□□□ 0.65
COL11A1P12107 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.1■□□□□ 0.65
COL11A1P12107 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COL11A1P12107 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL11A1P12107 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 AL080243.2-201ENST00000418783 582 ntBASIC19.09■□□□□ 0.65
COL11A1P12107 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COL11A1P12107 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.09■□□□□ 0.65
COL11A1P12107 AC021097.1-201ENST00000607902 574 ntBASIC19.09■□□□□ 0.65
COL11A1P12107 AC022144.1-201ENST00000602255 1580 ntBASIC19.09■□□□□ 0.65
COL11A1P12107 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL11A1P12107 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COL11A1P12107 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.09■□□□□ 0.65
COL11A1P12107 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.09■□□□□ 0.65
COL11A1P12107 RARRES2P9-201ENST00000565168 469 ntBASIC19.09■□□□□ 0.65
COL11A1P12107 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.09■□□□□ 0.65
COL11A1P12107 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.09■□□□□ 0.65
COL11A1P12107 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.09■□□□□ 0.65
COL11A1P12107 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL11A1P12107 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL11A1P12107 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.08■□□□□ 0.65
COL11A1P12107 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL11A1P12107 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
COL11A1P12107 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.08■□□□□ 0.65
COL11A1P12107 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL11A1P12107 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL11A1P12107 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.08■□□□□ 0.64
COL11A1P12107 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.08■□□□□ 0.64
COL11A1P12107 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 RNA5SP410-201ENST00000516285 106 ntBASIC19.08■□□□□ 0.64
COL11A1P12107 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.08■□□□□ 0.64
COL11A1P12107 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 AC239800.4-201ENST00000603712 296 ntBASIC19.08■□□□□ 0.64
COL11A1P12107 AC013467.2-201ENST00000605472 835 ntBASIC19.08■□□□□ 0.64
COL11A1P12107 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.08■□□□□ 0.64
COL11A1P12107 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 AL133373.2-201ENST00000623187 2828 ntBASIC19.08■□□□□ 0.64
COL11A1P12107 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
COL11A1P12107 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL11A1P12107 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.08■□□□□ 0.64
COL11A1P12107 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.07■□□□□ 0.64
COL11A1P12107 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.07■□□□□ 0.64
COL11A1P12107 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.07■□□□□ 0.64
COL11A1P12107 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.07■□□□□ 0.64
COL11A1P12107 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.07■□□□□ 0.64
COL11A1P12107 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.07■□□□□ 0.64
COL11A1P12107 AC004790.1-201ENST00000612686 536 ntBASIC19.07■□□□□ 0.64
COL11A1P12107 AL035252.4-201ENST00000624174 288 ntBASIC19.07■□□□□ 0.64
COL11A1P12107 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.07■□□□□ 0.64
COL11A1P12107 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.07■□□□□ 0.64
COL11A1P12107 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.07■□□□□ 0.64
COL11A1P12107 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL11A1P12107 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.07■□□□□ 0.64
COL11A1P12107 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms