Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.95■□□□□ 0.46
KRT3P12035 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KRT3P12035 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
KRT3P12035 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.95■□□□□ 0.46
KRT3P12035 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
KRT3P12035 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KRT3P12035 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 LAGE3P1-201ENST00000425356 484 ntBASIC17.94■□□□□ 0.46
KRT3P12035 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.94■□□□□ 0.46
KRT3P12035 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT3P12035 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT3P12035 AC073648.2-201ENST00000510116 352 ntBASIC17.94■□□□□ 0.46
KRT3P12035 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT3P12035 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.94■□□□□ 0.46
KRT3P12035 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT3P12035 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT3P12035 TERC-201ENST00000602385 541 ntBASIC17.94■□□□□ 0.46
KRT3P12035 AL121912.1-201ENST00000603683 238 ntBASIC17.94■□□□□ 0.46
KRT3P12035 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT3P12035 AC107918.4-202ENST00000641623 219 ntBASIC17.94■□□□□ 0.46
KRT3P12035 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT3P12035 TUBB8P12-201ENST00000308911 1335 ntBASIC17.94■□□□□ 0.46
KRT3P12035 TUBB7P-202ENST00000428444 1305 ntBASIC17.94■□□□□ 0.46
KRT3P12035 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT3P12035 TUBB8P7-204ENST00000567960 1332 ntBASIC17.94■□□□□ 0.46
KRT3P12035 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT3P12035 PCDHB17P-201ENST00000539533 2393 ntBASIC17.94■□□□□ 0.46
KRT3P12035 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
KRT3P12035 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT3P12035 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
KRT3P12035 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT3P12035 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
KRT3P12035 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 AL450487.1-201ENST00000426799 995 ntBASIC17.93■□□□□ 0.46
KRT3P12035 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT3P12035 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 RNPS1P1-201ENST00000507437 918 ntBASIC17.93■□□□□ 0.46
KRT3P12035 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT3P12035 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
KRT3P12035 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 RNF216P1-203ENST00000404404 2427 ntBASIC17.93■□□□□ 0.46
KRT3P12035 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT3P12035 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
KRT3P12035 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT3P12035 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT3P12035 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT3P12035 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
KRT3P12035 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT3P12035 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.92■□□□□ 0.46
KRT3P12035 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KRT3P12035 RPS2P1-201ENST00000434010 821 ntBASIC17.92■□□□□ 0.46
KRT3P12035 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 FAM197Y8-203ENST00000450145 560 ntBASIC17.92■□□□□ 0.46
KRT3P12035 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT3P12035 OR7E14P-202ENST00000530490 1290 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms