Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.11■□□□□ 0.33
RFPL1O75677 KRT16P4-201ENST00000453883 522 ntBASIC17.11■□□□□ 0.33
RFPL1O75677 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RFPL1O75677 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFPL1O75677 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.11■□□□□ 0.33
RFPL1O75677 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFPL1O75677 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.1■□□□□ 0.33
RFPL1O75677 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
RFPL1O75677 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.1■□□□□ 0.33
RFPL1O75677 PCDHA1-201ENST00000378133 2726 ntBASIC17.1■□□□□ 0.33
RFPL1O75677 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RFPL1O75677 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.1■□□□□ 0.33
RFPL1O75677 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.1■□□□□ 0.33
RFPL1O75677 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.1■□□□□ 0.33
RFPL1O75677 AC006538.3-201ENST00000612495 578 ntBASIC17.1■□□□□ 0.33
RFPL1O75677 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.1■□□□□ 0.33
RFPL1O75677 AD001527.2-201ENST00000622994 785 ntBASIC17.1■□□□□ 0.33
RFPL1O75677 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.1■□□□□ 0.33
RFPL1O75677 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RFPL1O75677 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RFPL1O75677 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFPL1O75677 AC092364.2-201ENST00000596710 2692 ntBASIC17.1■□□□□ 0.33
RFPL1O75677 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.1■□□□□ 0.33
RFPL1O75677 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.1■□□□□ 0.33
RFPL1O75677 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RFPL1O75677 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFPL1O75677 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
RFPL1O75677 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.09■□□□□ 0.33
RFPL1O75677 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.09■□□□□ 0.33
RFPL1O75677 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFPL1O75677 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RFPL1O75677 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RFPL1O75677 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RFPL1O75677 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.09■□□□□ 0.33
RFPL1O75677 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 AC011840.4-201ENST00000578471 627 ntBASIC17.09■□□□□ 0.33
RFPL1O75677 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.09■□□□□ 0.33
RFPL1O75677 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 AL391256.1-201ENST00000443260 1855 ntBASIC17.09■□□□□ 0.33
RFPL1O75677 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.09■□□□□ 0.33
RFPL1O75677 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFPL1O75677 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFPL1O75677 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFPL1O75677 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms