Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 AP001094.4-201ENST00000579008 2176 ntBASIC16.11■□□□□ 0.17
RDH16O75452 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RDH16O75452 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH16O75452 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RDH16O75452 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH16O75452 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.11■□□□□ 0.17
RDH16O75452 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RDH16O75452 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RDH16O75452 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RDH16O75452 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.11■□□□□ 0.17
RDH16O75452 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 PRORSD1P-202ENST00000563365 2154 ntBASIC16.1■□□□□ 0.17
RDH16O75452 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RDH16O75452 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 AL591424.1-201ENST00000442569 1213 ntBASIC16.1■□□□□ 0.17
RDH16O75452 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 HCG4B-203ENST00000450128 991 ntBASIC16.1■□□□□ 0.17
RDH16O75452 KRT18P3-201ENST00000451602 1288 ntBASIC16.1■□□□□ 0.17
RDH16O75452 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.1■□□□□ 0.17
RDH16O75452 RNA5SP416-201ENST00000516838 111 ntBASIC16.1■□□□□ 0.17
RDH16O75452 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.1■□□□□ 0.17
RDH16O75452 FAM197Y3-203ENST00000618346 717 ntBASIC16.1■□□□□ 0.17
RDH16O75452 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 AC060834.1-201ENST00000443027 2032 ntBASIC16.1■□□□□ 0.17
RDH16O75452 AC092068.3-201ENST00000587894 2016 ntBASIC16.1■□□□□ 0.17
RDH16O75452 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.1■□□□□ 0.17
RDH16O75452 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RDH16O75452 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
RDH16O75452 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.1■□□□□ 0.17
RDH16O75452 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RDH16O75452 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RDH16O75452 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH16O75452 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.09■□□□□ 0.17
RDH16O75452 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RDH16O75452 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.09■□□□□ 0.17
RDH16O75452 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.09■□□□□ 0.17
RDH16O75452 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.09■□□□□ 0.17
RDH16O75452 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
RDH16O75452 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.09■□□□□ 0.17
RDH16O75452 AC124947.2-201ENST00000547118 1133 ntBASIC16.09■□□□□ 0.17
RDH16O75452 AC018845.2-201ENST00000568326 409 ntBASIC16.09■□□□□ 0.17
RDH16O75452 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RDH16O75452 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.09■□□□□ 0.17
RDH16O75452 AC010507.1-201ENST00000633895 436 ntBASIC16.09■□□□□ 0.17
RDH16O75452 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.09■□□□□ 0.17
RDH16O75452 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RDH16O75452 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH16O75452 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH16O75452 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RDH16O75452 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.09■□□□□ 0.17
RDH16O75452 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.08■□□□□ 0.17
RDH16O75452 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RDH16O75452 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RDH16O75452 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RDH16O75452 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RDH16O75452 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
RDH16O75452 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RDH16O75452 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.08■□□□□ 0.17
RDH16O75452 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RDH16O75452 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RDH16O75452 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RDH16O75452 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RDH16O75452 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RDH16O75452 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RDH16O75452 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RDH16O75452 KRT18P2-201ENST00000447938 1258 ntBASIC16.08■□□□□ 0.16
RDH16O75452 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.08■□□□□ 0.16
RDH16O75452 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms