Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COCHO43405 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
COCHO43405 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.51■□□□□ 0.39
COCHO43405 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.51■□□□□ 0.39
COCHO43405 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.51■□□□□ 0.39
COCHO43405 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
COCHO43405 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COCHO43405 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
COCHO43405 RNU1-129P-201ENST00000384064 167 ntBASIC17.51■□□□□ 0.39
COCHO43405 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.51■□□□□ 0.39
COCHO43405 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.51■□□□□ 0.39
COCHO43405 FAM86C2P-203ENST00000528684 1004 ntBASIC17.51■□□□□ 0.39
COCHO43405 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.51■□□□□ 0.39
COCHO43405 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
COCHO43405 U1.21-201ENST00000580816 167 ntBASIC17.51■□□□□ 0.39
COCHO43405 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.51■□□□□ 0.39
COCHO43405 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
COCHO43405 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COCHO43405 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COCHO43405 AC108860.2-201ENST00000562760 2183 ntBASIC17.5■□□□□ 0.39
COCHO43405 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.5■□□□□ 0.39
COCHO43405 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.5■□□□□ 0.39
COCHO43405 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
COCHO43405 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.5■□□□□ 0.39
COCHO43405 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COCHO43405 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.5■□□□□ 0.39
COCHO43405 AC109635.5-201ENST00000533593 962 ntBASIC17.5■□□□□ 0.39
COCHO43405 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.5■□□□□ 0.39
COCHO43405 AC027796.2-201ENST00000575326 344 ntBASIC17.5■□□□□ 0.39
COCHO43405 MIR4492-201ENST00000581627 80 ntBASIC17.5■□□□□ 0.39
COCHO43405 AP001350.2-201ENST00000625104 1094 ntBASIC17.5■□□□□ 0.39
COCHO43405 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.5■□□□□ 0.39
COCHO43405 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COCHO43405 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 AC092068.3-201ENST00000587894 2016 ntBASIC17.5■□□□□ 0.39
COCHO43405 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COCHO43405 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.49■□□□□ 0.39
COCHO43405 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COCHO43405 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.49■□□□□ 0.39
COCHO43405 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COCHO43405 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.49■□□□□ 0.39
COCHO43405 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 TFAMP1-201ENST00000412727 736 ntBASIC17.49■□□□□ 0.39
COCHO43405 AC092474.2-201ENST00000424288 719 ntBASIC17.49■□□□□ 0.39
COCHO43405 SPDYE11-202ENST00000450699 704 ntBASIC17.49■□□□□ 0.39
COCHO43405 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.49■□□□□ 0.39
COCHO43405 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
COCHO43405 AL135744.1-201ENST00000565098 629 ntBASIC17.49■□□□□ 0.39
COCHO43405 RARRES2P8-201ENST00000566335 367 ntBASIC17.49■□□□□ 0.39
COCHO43405 SPDYE9P-201ENST00000570642 692 ntBASIC17.49■□□□□ 0.39
COCHO43405 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.49■□□□□ 0.39
COCHO43405 AL031055.1-201ENST00000606362 631 ntBASIC17.49■□□□□ 0.39
COCHO43405 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.49■□□□□ 0.39
COCHO43405 SPDYE10P-202ENST00000612005 668 ntBASIC17.49■□□□□ 0.39
COCHO43405 SPDYE8P-202ENST00000612377 668 ntBASIC17.49■□□□□ 0.39
COCHO43405 AL161645.1-201ENST00000622716 1255 ntBASIC17.49■□□□□ 0.39
COCHO43405 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
COCHO43405 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.49■□□□□ 0.39
COCHO43405 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.49■□□□□ 0.39
COCHO43405 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COCHO43405 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.49■□□□□ 0.39
COCHO43405 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COCHO43405 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms