Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.13■□□□□ 0.65
DDX39AO00148 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 RPS8P6-201ENST00000426177 609 ntBASIC19.13■□□□□ 0.65
DDX39AO00148 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.13■□□□□ 0.65
DDX39AO00148 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.13■□□□□ 0.65
DDX39AO00148 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 REXO1L3P-201ENST00000622202 1288 ntBASIC19.13■□□□□ 0.65
DDX39AO00148 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DDX39AO00148 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.13■□□□□ 0.65
DDX39AO00148 LINC02012-201ENST00000608206 1725 ntBASIC19.13■□□□□ 0.65
DDX39AO00148 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.13■□□□□ 0.65
DDX39AO00148 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DDX39AO00148 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
DDX39AO00148 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 AC092919.2-201ENST00000623631 1645 ntBASIC19.12■□□□□ 0.65
DDX39AO00148 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
DDX39AO00148 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX39AO00148 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
DDX39AO00148 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.12■□□□□ 0.65
DDX39AO00148 AL691403.2-201ENST00000618460 490 ntBASIC19.12■□□□□ 0.65
DDX39AO00148 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
DDX39AO00148 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.12■□□□□ 0.65
DDX39AO00148 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DDX39AO00148 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX39AO00148 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX39AO00148 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX39AO00148 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.11■□□□□ 0.65
DDX39AO00148 AC074386.1-202ENST00000463561 864 ntBASIC19.11■□□□□ 0.65
DDX39AO00148 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX39AO00148 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX39AO00148 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX39AO00148 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.11■□□□□ 0.65
DDX39AO00148 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.11■□□□□ 0.65
DDX39AO00148 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
DDX39AO00148 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DDX39AO00148 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.1■□□□□ 0.65
DDX39AO00148 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX39AO00148 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.1■□□□□ 0.65
DDX39AO00148 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DDX39AO00148 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms