Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 KRT8P39-201ENST00000396270 1433 ntBASIC24.95■■□□□ 1.58
HFM1A2PYH4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 AL671277.1-201ENST00000429656 993 ntBASIC24.95■■□□□ 1.58
HFM1A2PYH4 GPS2P2-201ENST00000430745 888 ntBASIC24.95■■□□□ 1.58
HFM1A2PYH4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 GATB-205ENST00000508611 605 ntTSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 AC004835.2-201ENST00000603762 682 ntBASIC24.95■■□□□ 1.58
HFM1A2PYH4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
HFM1A2PYH4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HFM1A2PYH4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HFM1A2PYH4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
HFM1A2PYH4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HFM1A2PYH4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HFM1A2PYH4 METTL21AP1-201ENST00000438852 635 ntBASIC24.94■■□□□ 1.58
HFM1A2PYH4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 SNHG9-202ENST00000564014 471 ntBASIC24.94■■□□□ 1.58
HFM1A2PYH4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
HFM1A2PYH4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HFM1A2PYH4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HFM1A2PYH4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
HFM1A2PYH4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HFM1A2PYH4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HFM1A2PYH4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HFM1A2PYH4 TSEN15P1-201ENST00000423257 515 ntBASIC24.92■■□□□ 1.58
HFM1A2PYH4 RFPL4AP1-201ENST00000530883 850 ntBASIC24.92■■□□□ 1.58
HFM1A2PYH4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC24.92■■□□□ 1.58
HFM1A2PYH4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 FOXO1B-201ENST00000504678 1527 ntBASIC24.91■■□□□ 1.58
HFM1A2PYH4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 CD99-202ENST00000381180 530 ntTSL 2 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
HFM1A2PYH4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HFM1A2PYH4 GGT4P-201ENST00000623672 1708 ntBASIC24.91■■□□□ 1.58
HFM1A2PYH4 AL512652.2-201ENST00000625156 1716 ntBASIC24.91■■□□□ 1.58
HFM1A2PYH4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC24.9■■□□□ 1.58
HFM1A2PYH4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 AL603756.1-201ENST00000606511 2163 ntBASIC24.9■■□□□ 1.58
HFM1A2PYH4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HFM1A2PYH4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms