Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 FLJ38576-201ENST00000623820 2459 ntBASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA11Q9Y5H2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 AC097637.2-201ENST00000624096 1997 ntBASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 RBM17P3-201ENST00000417687 1192 ntBASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 PRYP5-201ENST00000451909 266 ntBASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 AP001269.4-201ENST00000609611 512 ntBASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGA11Q9Y5H2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms