Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AL353593.2-201ENST00000602529 1483 ntBASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 STK25P1-201ENST00000585406 838 ntBASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 FLJ16779-201ENST00000612722 7638 ntBASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 AL603756.1-201ENST00000606511 2163 ntBASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.98□□□□□ -0.01
RHBDD3Q9Y3P4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 RCN1P2-201ENST00000398357 915 ntBASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 ATP5G2P1-201ENST00000433580 426 ntBASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 AC104819.1-201ENST00000504587 486 ntBASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 AC092329.2-201ENST00000598402 547 ntBASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 AC093458.2-201ENST00000623150 629 ntBASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RHBDD3Q9Y3P4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 INTS4P1-201ENST00000438455 1935 ntBASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RHBDD3Q9Y3P4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms