Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 AC073389.1-201ENST00000595595 795 ntBASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 AC099568.2-201ENST00000609194 695 ntBASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZC3H4Q9UPT8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.45■□□□□ 0.87
ZC3H4Q9UPT8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 AC073592.3-201ENST00000625118 1834 ntBASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 SPTSSB-204ENST00000617024 1292 ntBASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZC3H4Q9UPT8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 AC016027.1-202ENST00000607927 1699 ntBASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 CETN4P-206ENST00000642099 2168 ntBASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZC3H4Q9UPT8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 AC119751.2-201ENST00000504529 210 ntBASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 WASH4P-201ENST00000564273 1246 ntBASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 COX11-210ENST00000639671 696 ntBASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 AC126763.1-201ENST00000552015 2118 ntBASIC20.43■□□□□ 0.86
ZC3H4Q9UPT8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms