Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 HCG4-201ENST00000418983 998 ntBASIC17.96■□□□□ 0.47
CDH9Q9ULB4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 ALG1L5P-201ENST00000482043 771 ntBASIC17.96■□□□□ 0.47
CDH9Q9ULB4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 AC012569.1-201ENST00000591191 1524 ntBASIC17.96■□□□□ 0.47
CDH9Q9ULB4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH9Q9ULB4 TUBB8P12-201ENST00000308911 1335 ntBASIC17.96■□□□□ 0.46
CDH9Q9ULB4 TUBB7P-202ENST00000428444 1305 ntBASIC17.96■□□□□ 0.46
CDH9Q9ULB4 TUBB8P7-204ENST00000567960 1332 ntBASIC17.96■□□□□ 0.46
CDH9Q9ULB4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH9Q9ULB4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 HTR5BP-201ENST00000430851 1154 ntBASIC17.95■□□□□ 0.46
CDH9Q9ULB4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AP002472.1-201ENST00000577490 586 ntBASIC17.95■□□□□ 0.46
CDH9Q9ULB4 MPDU1-223ENST00000582151 728 ntBASIC17.95■□□□□ 0.46
CDH9Q9ULB4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AL078644.1-201ENST00000609881 752 ntBASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AC055717.3-201ENST00000622967 595 ntBASIC17.95■□□□□ 0.46
CDH9Q9ULB4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CDH9Q9ULB4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 AL645608.8-201ENST00000606034 2086 ntBASIC17.94■□□□□ 0.46
CDH9Q9ULB4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 SLC22A20-204ENST00000530038 1673 ntBASIC17.94■□□□□ 0.46
CDH9Q9ULB4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 HMGA1P7-201ENST00000406908 502 ntBASIC17.94■□□□□ 0.46
CDH9Q9ULB4 FAM58CP-201ENST00000435741 640 ntBASIC17.94■□□□□ 0.46
CDH9Q9ULB4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 YBX1P5-201ENST00000509441 847 ntBASIC17.94■□□□□ 0.46
CDH9Q9ULB4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH9Q9ULB4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH9Q9ULB4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms