Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AC068587.6-202ENST00000641839 5619 ntBASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 AC010460.3-201ENST00000511359 1579 ntBASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.22□□□□□ -0.13
LIN7CQ9NUP9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 DOC2GP-204ENST00000639052 2548 ntBASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 AC104819.1-201ENST00000504587 486 ntBASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 AC111152.3-201ENST00000569699 673 ntBASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.21□□□□□ -0.13
LIN7CQ9NUP9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
LIN7CQ9NUP9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 AP000867.3-201ENST00000524675 377 ntBASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 AC109462.3-201ENST00000573934 613 ntBASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIN7CQ9NUP9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms