Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.42■□□□□ 0.86
SALL1Q9NSC2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 AC022211.2-201ENST00000585075 2527 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 TFAMP1-201ENST00000412727 736 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SPDYE11-202ENST00000450699 704 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 AC243562.1-201ENST00000560672 389 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 AL135744.1-201ENST00000565098 629 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SPDYE9P-201ENST00000570642 692 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SPDYE10P-202ENST00000612005 668 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SPDYE8P-202ENST00000612377 668 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SALL1Q9NSC2 KRT8P49-201ENST00000604166 1432 ntBASIC20.41■□□□□ 0.86
SALL1Q9NSC2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 AC012313.1-201ENST00000593393 3059 ntBASIC20.4■□□□□ 0.86
SALL1Q9NSC2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 RNU1-129P-201ENST00000384064 167 ntBASIC20.4■□□□□ 0.86
SALL1Q9NSC2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 U1.21-201ENST00000580816 167 ntBASIC20.4■□□□□ 0.86
SALL1Q9NSC2 MPDU1-223ENST00000582151 728 ntBASIC20.4■□□□□ 0.86
SALL1Q9NSC2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 AC093028.1-201ENST00000622998 982 ntBASIC20.4■□□□□ 0.86
SALL1Q9NSC2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SALL1Q9NSC2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SALL1Q9NSC2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SALL1Q9NSC2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SALL1Q9NSC2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 AC079140.1-201ENST00000508039 487 ntBASIC20.39■□□□□ 0.85
SALL1Q9NSC2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 AC124947.2-201ENST00000547118 1133 ntBASIC20.39■□□□□ 0.85
SALL1Q9NSC2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 AC087641.1-201ENST00000557561 1021 ntBASIC20.39■□□□□ 0.85
SALL1Q9NSC2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.39■□□□□ 0.85
SALL1Q9NSC2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms