Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 SIGLEC16-201ENST00000599858 1437 ntBASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 AL020989.1-201ENST00000422979 469 ntBASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 AC148477.8-201ENST00000624298 468 ntBASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NECTIN3Q9NQS3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
NECTIN3Q9NQS3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 RNPS1P1-201ENST00000507437 918 ntBASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 SLC25A6P4-201ENST00000586535 553 ntBASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 AL139327.4-201ENST00000612362 153 ntBASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NECTIN3Q9NQS3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 AC009336.1-201ENST00000608941 1553 ntBASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NECTIN3Q9NQS3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms