Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 AL603756.1-201ENST00000606511 2163 ntBASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 AP002469.2-201ENST00000531724 424 ntBASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 GGTLC5P-201ENST00000617623 998 ntBASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCSER1Q9C0I3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 AC006277.1-201ENST00000624348 1610 ntBASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 AC026396.1-201ENST00000419388 421 ntBASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 IGHV3-65-201ENST00000523210 341 ntBASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 AL160237.2-201ENST00000556165 472 ntBASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 FAM215A-202ENST00000632077 792 ntBASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCSER1Q9C0I3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 RPS2P28-201ENST00000314255 741 ntBASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 AL356488.2-201ENST00000602755 427 ntBASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 PGM5P2-202ENST00000637225 1043 ntBASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 AL139011.1-202ENST00000642063 584 ntBASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 PCDHA14-201ENST00000506751 2298 ntBASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms