Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 CHEK2-206ENST00000402731 1545 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 MTCO1P28-201ENST00000574177 1528 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC01960-201ENST00000563759 1884 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 RPL5P35-201ENST00000398869 816 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL139098.1-201ENST00000407291 389 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 RABGAP1L-IT1-201ENST00000414890 737 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL008987.1-201ENST00000415528 237 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 HNRNPA1P29-201ENST00000426409 879 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC009784.1-201ENST00000426484 460 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 MTND4LP14-201ENST00000429447 288 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL441943.1-201ENST00000435539 432 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 RPS13P2-201ENST00000437890 455 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 Z98949.2-201ENST00000440996 144 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 YWHABP1-201ENST00000445359 727 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL606662.1-201ENST00000445763 553 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 BX842559.2-201ENST00000451418 605 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC080013.1-205ENST00000477589 1087 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 EIF1P7-201ENST00000487533 337 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC005178.1-201ENST00000508392 440 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC013701.1-201ENST00000522657 465 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 OR10D4P-201ENST00000525892 951 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 LRP1-AS-202ENST00000555461 645 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 CCDC32-205ENST00000558871 1075 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC104564.6-201ENST00000582881 1052 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC019193.3-201ENST00000609144 554 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC090425.1-201ENST00000610007 140 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC009704.2-201ENST00000618739 483 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AD000813.1-201ENST00000624007 832 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 AC105339.4-201ENST00000624471 737 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 MIR1322-201ENST00000638013 71 ntBASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
KRTAP3-3Q9BYR6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 MR1-201ENST00000282990 2043 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 IL26-201ENST00000229134 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 FRG1BP-201ENST00000278882 761 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 ELOCP9-201ENST00000418624 239 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 SLC4A1APP1-201ENST00000419995 602 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AP002381.1-201ENST00000439829 615 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 AC068135.1-201ENST00000446164 246 ntBASIC10.74□□□□□ -0.69
KRTAP3-3Q9BYR6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms