Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 KLF4P1-201ENST00000412782 1185 ntBASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 AC090616.6-201ENST00000582640 721 ntBASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.43□□□□□ -0.1
HDHD3Q9BSH5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 AP005901.3-202ENST00000581653 237 ntBASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 AL391256.1-201ENST00000443260 1855 ntBASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HDHD3Q9BSH5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 AC003669.1-201ENST00000334569 611 ntBASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.41□□□□□ -0.1
HDHD3Q9BSH5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms