Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 HMGA1P7-201ENST00000406908 502 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 TFAMP1-201ENST00000412727 736 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 AL627223.1-201ENST00000416693 442 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 RN7SL589P-201ENST00000481268 310 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 AC092364.2-202ENST00000597012 1073 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 AC093512.1-201ENST00000617969 520 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 AC012569.1-201ENST00000591191 1524 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 AL592309.1-201ENST00000443127 649 ntBASIC17.05■□□□□ 0.32
SIPA1Q96FS4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 AL161645.1-201ENST00000622716 1255 ntBASIC17.05■□□□□ 0.32
SIPA1Q96FS4 AC009093.7-201ENST00000623853 1223 ntBASIC17.05■□□□□ 0.32
SIPA1Q96FS4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.05■□□□□ 0.32
SIPA1Q96FS4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.04■□□□□ 0.32
SIPA1Q96FS4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 FAM8A3P-201ENST00000427218 844 ntBASIC17.04■□□□□ 0.32
SIPA1Q96FS4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 AC079140.1-201ENST00000508039 487 ntBASIC17.04■□□□□ 0.32
SIPA1Q96FS4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 AC093520.2-201ENST00000561830 333 ntBASIC17.04■□□□□ 0.32
SIPA1Q96FS4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 RARRES2P8-201ENST00000566335 367 ntBASIC17.04■□□□□ 0.32
SIPA1Q96FS4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SIPA1Q96FS4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AKAP8P1-201ENST00000434743 1349 ntBASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.03■□□□□ 0.32
SIPA1Q96FS4 FAM86GP-201ENST00000448322 971 ntBASIC17.03■□□□□ 0.32
SIPA1Q96FS4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms