Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 AC243591.1-201ENST00000452967 1364 ntBASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 SIGLEC16-201ENST00000599858 1437 ntBASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 SPDYE21P-201ENST00000413323 827 ntBASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 AL022326.1-202ENST00000641533 845 ntBASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 HLA-J-201ENST00000462773 1622 ntBASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
NEIL3Q8TAT5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 AL049757.1-201ENST00000616842 1596 ntBASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 BX005266.1-201ENST00000473402 457 ntBASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 AC116407.3-201ENST00000623905 1129 ntBASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 AC107918.4-202ENST00000641623 219 ntBASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NEIL3Q8TAT5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NEIL3Q8TAT5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms