Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NPAS4Q8IUM7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NPAS4Q8IUM7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 AC005034.1-201ENST00000426657 489 ntBASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 AC092580.3-201ENST00000430932 139 ntBASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 MIR4453-201ENST00000584019 89 ntBASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 AC021097.1-201ENST00000607902 574 ntBASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 AL021920.2-201ENST00000624828 1351 ntBASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 KRT8P49-201ENST00000604166 1432 ntBASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.14■□□□□ 0.49
NPAS4Q8IUM7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 AL138918.1-201ENST00000568306 659 ntBASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NPAS4Q8IUM7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 CYP2A7P1-201ENST00000595391 815 ntBASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 AC012645.4-201ENST00000610691 1061 ntBASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 AC063926.2-201ENST00000623766 1308 ntBASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS4Q8IUM7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 AC142381.1-201ENST00000426099 345 ntBASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 AC241585.1-201ENST00000433527 519 ntBASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 AC105233.2-201ENST00000523697 349 ntBASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 AF228730.5-201ENST00000530288 346 ntBASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 AC005225.4-201ENST00000557330 545 ntBASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS4Q8IUM7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms