Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC023274.1-201ENST00000418278 595 ntBASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 AC023141.13-201ENST00000604991 943 ntBASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 ACTL9-202ENST00000612068 1252 ntBASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 AC004877.2-201ENST00000623941 599 ntBASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 BCAR1-209ENST00000546196 1340 ntBASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRTM4Q86VH4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 AC092053.1-201ENST00000605787 1936 ntBASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 BX842568.4-201ENST00000421222 227 ntBASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 AL513480.1-201ENST00000451731 511 ntBASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 AC023511.2-201ENST00000618803 211 ntBASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRTM4Q86VH4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 AC004832.2-201ENST00000426397 482 ntBASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 AC092865.5-201ENST00000545435 363 ntBASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 DUX4L17-201ENST00000557360 1267 ntBASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRTM4Q86VH4 AC005412.3-201ENST00000580309 715 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms