Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 FAM215A-202ENST00000632077 792 ntBASIC16.8■□□□□ 0.28
SYVN1Q86TM6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 AC009336.1-201ENST00000608941 1553 ntBASIC16.8■□□□□ 0.28
SYVN1Q86TM6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYVN1Q86TM6 AC132938.5-201ENST00000624980 1813 ntBASIC16.8■□□□□ 0.28
SYVN1Q86TM6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 AC243591.1-201ENST00000452967 1364 ntBASIC16.79■□□□□ 0.28
SYVN1Q86TM6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 STK19B-204ENST00000512515 211 ntBASIC16.79■□□□□ 0.28
SYVN1Q86TM6 AC124947.2-201ENST00000547118 1133 ntBASIC16.79■□□□□ 0.28
SYVN1Q86TM6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 AC106730.1-201ENST00000566722 1090 ntBASIC16.79■□□□□ 0.28
SYVN1Q86TM6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 MIR7706-201ENST00000613747 67 ntBASIC16.79■□□□□ 0.28
SYVN1Q86TM6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
SYVN1Q86TM6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 AC078925.2-201ENST00000624013 1973 ntBASIC16.78■□□□□ 0.28
SYVN1Q86TM6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SYVN1Q86TM6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms