Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 AP002414.1-201ENST00000391405 1147 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 AC120114.3-201ENST00000611923 658 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 AC005593.1-201ENST00000624894 515 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 AC008894.3-201ENST00000624324 3103 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 PI4KAP1-204ENST00000612579 1703 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 FRMD8P1-201ENST00000440433 1524 ntBASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD3Q7Z3D4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.34
LYSMD3Q7Z3D4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AL022342.1-201ENST00000400363 863 ntBASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AP000347.1-202ENST00000435868 847 ntBASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 IL9RP2-201ENST00000423948 1312 ntBASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AL118508.1-201ENST00000613502 2345 ntBASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.14■□□□□ 0.33
LYSMD3Q7Z3D4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 IGHV3-22-201ENST00000520721 359 ntBASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 TERC-201ENST00000602385 541 ntBASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 AC008667.4-201ENST00000607370 168 ntBASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD3Q7Z3D4 PGM5P2-202ENST00000637225 1043 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms