Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AP001269.4-201ENST00000609611 512 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 INTS4P1-201ENST00000438455 1935 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 AL596257.1-201ENST00000641463 2694 ntBASIC11.36□□□□□ -0.59
SCXQ7RTU7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
SCXQ7RTU7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SCXQ7RTU7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC108860.2-201ENST00000562760 2183 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AL162727.3-201ENST00000635661 2787 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 PMS2P1-201ENST00000431037 1228 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC018712.1-201ENST00000455767 687 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 SLC25A1P1-201ENST00000528351 927 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC011467.2-201ENST00000598425 242 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AF228730.7-201ENST00000641842 219 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 GMCL1P1-201ENST00000463439 1581 ntBASIC11.35□□□□□ -0.59
SCXQ7RTU7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SCXQ7RTU7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.35□□□□□ -0.59
SCXQ7RTU7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SCXQ7RTU7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.34□□□□□ -0.59
SCXQ7RTU7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms