Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DCLRE1AQ6PJP8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DCLRE1AQ6PJP8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DCLRE1AQ6PJP8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.14■□□□□ 0.5
DCLRE1AQ6PJP8 FRMD8P1-201ENST00000440433 1524 ntBASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 HCG4-201ENST00000418983 998 ntBASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 AC091167.2-201ENST00000579581 588 ntBASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 AC099522.2-201ENST00000607001 744 ntBASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 AC090340.1-201ENST00000620778 4980 ntBASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.14■□□□□ 0.49
DCLRE1AQ6PJP8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 MIR770-201ENST00000390219 98 ntBASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 ADH5P3-201ENST00000433842 1137 ntBASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 AC011467.4-201ENST00000594891 528 ntBASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 AC022145.2-201ENST00000598203 171 ntBASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 AC027612.4-201ENST00000605371 583 ntBASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 AC026120.1-201ENST00000611536 926 ntBASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DCLRE1AQ6PJP8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 AL355306.1-201ENST00000415580 579 ntBASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 DUX4L17-201ENST00000557360 1267 ntBASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 AL021920.2-201ENST00000624828 1351 ntBASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.12■□□□□ 0.49
DCLRE1AQ6PJP8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DCLRE1AQ6PJP8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms