Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.95■□□□□ 0.94
DDR1Q08345 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
DDR1Q08345 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.95■□□□□ 0.94
DDR1Q08345 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.95■□□□□ 0.94
DDR1Q08345 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.95■□□□□ 0.94
DDR1Q08345 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.95■□□□□ 0.94
DDR1Q08345 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DDR1Q08345 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.95■□□□□ 0.94
DDR1Q08345 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DDR1Q08345 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
DDR1Q08345 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.94■□□□□ 0.94
DDR1Q08345 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.94■□□□□ 0.94
DDR1Q08345 AC104581.1-202ENST00000635932 2618 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 AC012317.2-201ENST00000623305 2251 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDR1Q08345 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.94■□□□□ 0.94
DDR1Q08345 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 AC098614.1-201ENST00000368528 745 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 HLA-H-201ENST00000383620 1096 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.94■□□□□ 0.94
DDR1Q08345 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.94■□□□□ 0.94
DDR1Q08345 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.94■□□□□ 0.94
DDR1Q08345 WASH4P-201ENST00000564273 1246 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 MIR4492-201ENST00000581627 80 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.94■□□□□ 0.94
DDR1Q08345 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.94■□□□□ 0.94
DDR1Q08345 AC021097.1-201ENST00000607902 574 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 AL035456.1-201ENST00000456064 1369 ntBASIC20.94■□□□□ 0.94
DDR1Q08345 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
DDR1Q08345 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.94■□□□□ 0.94
DDR1Q08345 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.94■□□□□ 0.94
DDR1Q08345 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDR1Q08345 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.93■□□□□ 0.94
DDR1Q08345 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 AC009113.1-201ENST00000570267 2443 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.93■□□□□ 0.94
DDR1Q08345 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.93■□□□□ 0.94
DDR1Q08345 MIR1909-201ENST00000411312 80 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
DDR1Q08345 MTND6P24-201ENST00000440466 518 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.93■□□□□ 0.94
DDR1Q08345 AC132938.2-201ENST00000579188 680 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 AL591163.1-201ENST00000641757 987 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
DDR1Q08345 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
DDR1Q08345 AL355312.1-201ENST00000407115 2176 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 CETN4P-206ENST00000642099 2168 ntBASIC20.93■□□□□ 0.94
DDR1Q08345 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.93■□□□□ 0.94
DDR1Q08345 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDR1Q08345 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDR1Q08345 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.92■□□□□ 0.94
DDR1Q08345 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 KRT18P34-201ENST00000488218 1270 ntBASIC20.92■□□□□ 0.94
DDR1Q08345 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 PRYP6-201ENST00000514804 343 ntBASIC20.92■□□□□ 0.94
DDR1Q08345 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.92■□□□□ 0.94
DDR1Q08345 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 AC104794.3-201ENST00000566840 1248 ntBASIC20.92■□□□□ 0.94
DDR1Q08345 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.92■□□□□ 0.94
DDR1Q08345 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DDR1Q08345 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms