Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.83■□□□□ 0.77
IRX3P78415 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
IRX3P78415 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
IRX3P78415 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IRX3P78415 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
IRX3P78415 AC005237.2-201ENST00000434368 219 ntBASIC19.83■□□□□ 0.77
IRX3P78415 AC140658.5-201ENST00000438532 169 ntBASIC19.83■□□□□ 0.77
IRX3P78415 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.83■□□□□ 0.77
IRX3P78415 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.83■□□□□ 0.77
IRX3P78415 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.83■□□□□ 0.77
IRX3P78415 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
IRX3P78415 AC009093.7-201ENST00000623853 1223 ntBASIC19.83■□□□□ 0.77
IRX3P78415 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
IRX3P78415 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
IRX3P78415 AL138781.2-201ENST00000617896 1843 ntBASIC19.83■□□□□ 0.76
IRX3P78415 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.83■□□□□ 0.76
IRX3P78415 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.82■□□□□ 0.76
IRX3P78415 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.82■□□□□ 0.76
IRX3P78415 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
IRX3P78415 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.82■□□□□ 0.76
IRX3P78415 AC092474.2-201ENST00000424288 719 ntBASIC19.82■□□□□ 0.76
IRX3P78415 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 AC093520.2-201ENST00000561830 333 ntBASIC19.82■□□□□ 0.76
IRX3P78415 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.82■□□□□ 0.76
IRX3P78415 AC005498.2-205ENST00000593218 784 ntBASIC19.82■□□□□ 0.76
IRX3P78415 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.82■□□□□ 0.76
IRX3P78415 AC099522.2-201ENST00000607001 744 ntBASIC19.82■□□□□ 0.76
IRX3P78415 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
IRX3P78415 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
IRX3P78415 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
IRX3P78415 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX3P78415 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX3P78415 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
IRX3P78415 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX3P78415 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX3P78415 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 KRT8P48-201ENST00000515599 1220 ntBASIC19.81■□□□□ 0.76
IRX3P78415 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.81■□□□□ 0.76
IRX3P78415 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
IRX3P78415 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.81■□□□□ 0.76
IRX3P78415 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.81■□□□□ 0.76
IRX3P78415 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.81■□□□□ 0.76
IRX3P78415 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.81■□□□□ 0.76
IRX3P78415 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
IRX3P78415 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.8■□□□□ 0.76
IRX3P78415 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
IRX3P78415 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms