Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX4P78413 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.79■□□□□ 0.44
IRX4P78413 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.79■□□□□ 0.44
IRX4P78413 DUTP2-201ENST00000519164 463 ntBASIC17.79■□□□□ 0.44
IRX4P78413 UNC93B6-202ENST00000528242 690 ntBASIC17.79■□□□□ 0.44
IRX4P78413 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
IRX4P78413 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 AC133963.1-201ENST00000504166 1679 ntBASIC17.79■□□□□ 0.44
IRX4P78413 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IRX4P78413 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
IRX4P78413 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.79■□□□□ 0.44
IRX4P78413 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.79■□□□□ 0.44
IRX4P78413 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
IRX4P78413 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IRX4P78413 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.78■□□□□ 0.44
IRX4P78413 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.78■□□□□ 0.44
IRX4P78413 AC007967.2-201ENST00000432613 625 ntBASIC17.78■□□□□ 0.44
IRX4P78413 RNA5SP416-201ENST00000516838 111 ntBASIC17.78■□□□□ 0.44
IRX4P78413 AC105339.3-201ENST00000560043 636 ntBASIC17.78■□□□□ 0.44
IRX4P78413 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX4P78413 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IRX4P78413 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX4P78413 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.77■□□□□ 0.44
IRX4P78413 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.77■□□□□ 0.44
IRX4P78413 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
IRX4P78413 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.77■□□□□ 0.44
IRX4P78413 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 AC004832.2-201ENST00000426397 482 ntBASIC17.77■□□□□ 0.44
IRX4P78413 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX4P78413 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms