Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.1□□□□□ -0.47
RPL39P62891 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
RPL39P62891 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.1□□□□□ -0.47
RPL39P62891 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.1□□□□□ -0.47
RPL39P62891 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.1□□□□□ -0.47
RPL39P62891 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.1□□□□□ -0.47
RPL39P62891 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RPL39P62891 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.1□□□□□ -0.47
RPL39P62891 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RPL39P62891 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RPL39P62891 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RPL39P62891 AC010460.3-201ENST00000511359 1579 ntBASIC12.09□□□□□ -0.47
RPL39P62891 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RPL39P62891 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.09□□□□□ -0.47
RPL39P62891 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 MYCLP1-201ENST00000372451 1075 ntBASIC12.09□□□□□ -0.47
RPL39P62891 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 AP000523.1-201ENST00000398242 1049 ntBASIC12.09□□□□□ -0.47
RPL39P62891 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 TSPY7P-201ENST00000431358 1114 ntBASIC12.09□□□□□ -0.47
RPL39P62891 KRT18P48-201ENST00000434763 852 ntBASIC12.09□□□□□ -0.47
RPL39P62891 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 MTCL1P1-201ENST00000446207 792 ntBASIC12.09□□□□□ -0.47
RPL39P62891 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 AC098590.1-201ENST00000468126 897 ntBASIC12.09□□□□□ -0.47
RPL39P62891 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.09□□□□□ -0.47
RPL39P62891 AC034232.1-201ENST00000506026 1064 ntBASIC12.09□□□□□ -0.47
RPL39P62891 IGHV3-52-201ENST00000519770 353 ntBASIC12.09□□□□□ -0.47
RPL39P62891 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 Z99916.2-201ENST00000604037 246 ntBASIC12.09□□□□□ -0.47
RPL39P62891 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
RPL39P62891 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.09□□□□□ -0.47
RPL39P62891 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.09□□□□□ -0.47
RPL39P62891 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RPL39P62891 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RPL39P62891 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
RPL39P62891 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.09□□□□□ -0.47
RPL39P62891 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RPL39P62891 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RPL39P62891 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.08□□□□□ -0.47
RPL39P62891 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.08□□□□□ -0.47
RPL39P62891 AL391807.1-203ENST00000604392 2365 ntBASIC12.08□□□□□ -0.47
RPL39P62891 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RPL39P62891 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RPL39P62891 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.08□□□□□ -0.48
RPL39P62891 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms