Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP001005.1-201ENST00000571755 1248 ntBASIC15.69■□□□□ 0.1
CLDN20P56880 AL049840.3-201ENST00000602669 611 ntBASIC15.69■□□□□ 0.1
CLDN20P56880 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN20P56880 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CLDN20P56880 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLDN20P56880 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLDN20P56880 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN20P56880 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN20P56880 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN20P56880 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.68■□□□□ 0.1
CLDN20P56880 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN20P56880 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CLDN20P56880 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN20P56880 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 AL139327.4-201ENST00000612362 153 ntBASIC15.68■□□□□ 0.1
CLDN20P56880 FAM215A-202ENST00000632077 792 ntBASIC15.68■□□□□ 0.1
CLDN20P56880 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN20P56880 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 AC106886.4-201ENST00000623557 2502 ntBASIC15.68■□□□□ 0.1
CLDN20P56880 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN20P56880 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 LYSMD4-203ENST00000378904 2122 ntBASIC15.68■□□□□ 0.1
CLDN20P56880 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN20P56880 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN20P56880 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CLDN20P56880 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN20P56880 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN20P56880 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.67■□□□□ 0.1
CLDN20P56880 OR7E14P-202ENST00000530490 1290 ntBASIC15.67■□□□□ 0.1
CLDN20P56880 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.67■□□□□ 0.1
CLDN20P56880 MIR7706-201ENST00000613747 67 ntBASIC15.67■□□□□ 0.1
CLDN20P56880 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN20P56880 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLDN20P56880 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CLDN20P56880 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN20P56880 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLDN20P56880 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CLDN20P56880 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.67■□□□□ 0.1
CLDN20P56880 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN20P56880 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
CLDN20P56880 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms