Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.68■□□□□ 0.1
CDH11P55287 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH11P55287 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH11P55287 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CDH11P55287 FAAHP1-202ENST00000446499 1238 ntBASIC15.67■□□□□ 0.1
CDH11P55287 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH11P55287 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH11P55287 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH11P55287 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.67■□□□□ 0.1
CDH11P55287 AC011840.4-201ENST00000578471 627 ntBASIC15.67■□□□□ 0.1
CDH11P55287 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.67■□□□□ 0.1
CDH11P55287 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH11P55287 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDH11P55287 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.67■□□□□ 0.1
CDH11P55287 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.67■□□□□ 0.1
CDH11P55287 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 AC008894.3-201ENST00000624324 3103 ntBASIC15.67■□□□□ 0.1
CDH11P55287 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 AC046158.3-201ENST00000624947 2558 ntBASIC15.67■□□□□ 0.1
CDH11P55287 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDH11P55287 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CDH11P55287 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH11P55287 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 RNF216P1-203ENST00000404404 2427 ntBASIC15.66■□□□□ 0.1
CDH11P55287 AC079328.2-201ENST00000561241 3354 ntBASIC15.66■□□□□ 0.1
CDH11P55287 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 TSPY19P-201ENST00000418461 509 ntBASIC15.66■□□□□ 0.1
CDH11P55287 TSPY18P-201ENST00000441642 509 ntBASIC15.66■□□□□ 0.1
CDH11P55287 MINOS1P3-201ENST00000457048 203 ntBASIC15.66■□□□□ 0.1
CDH11P55287 RN7SL606P-201ENST00000472779 293 ntBASIC15.66■□□□□ 0.1
CDH11P55287 KRT18P31-201ENST00000506277 1292 ntBASIC15.66■□□□□ 0.1
CDH11P55287 UNC93B7-201ENST00000509439 705 ntBASIC15.66■□□□□ 0.1
CDH11P55287 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH11P55287 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH11P55287 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH11P55287 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH11P55287 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH11P55287 AC078925.2-201ENST00000624013 1973 ntBASIC15.66■□□□□ 0.1
CDH11P55287 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH11P55287 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms