Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
ATN1P54259 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.68■□□□□ 0.58
ATN1P54259 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.68■□□□□ 0.58
ATN1P54259 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.68■□□□□ 0.58
ATN1P54259 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.68■□□□□ 0.58
ATN1P54259 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.68■□□□□ 0.58
ATN1P54259 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.68■□□□□ 0.58
ATN1P54259 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.68■□□□□ 0.58
ATN1P54259 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.68■□□□□ 0.58
ATN1P54259 AL132655.2-201ENST00000596276 594 ntBASIC18.68■□□□□ 0.58
ATN1P54259 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.68■□□□□ 0.58
ATN1P54259 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.68■□□□□ 0.58
ATN1P54259 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATN1P54259 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ATN1P54259 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
ATN1P54259 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.68■□□□□ 0.58
ATN1P54259 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.67■□□□□ 0.58
ATN1P54259 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ATN1P54259 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.67■□□□□ 0.58
ATN1P54259 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 RARRES2P9-201ENST00000565168 469 ntBASIC18.67■□□□□ 0.58
ATN1P54259 AC016180.1-201ENST00000567945 403 ntBASIC18.67■□□□□ 0.58
ATN1P54259 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 AC133485.6-201ENST00000624045 688 ntBASIC18.67■□□□□ 0.58
ATN1P54259 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
ATN1P54259 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATN1P54259 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.67■□□□□ 0.58
ATN1P54259 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ATN1P54259 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATN1P54259 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.66■□□□□ 0.58
ATN1P54259 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
ATN1P54259 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATN1P54259 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
ATN1P54259 ELOCP6-201ENST00000429066 328 ntBASIC18.66■□□□□ 0.58
ATN1P54259 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.66■□□□□ 0.58
ATN1P54259 ELOCP12-201ENST00000458706 328 ntBASIC18.66■□□□□ 0.58
ATN1P54259 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.66■□□□□ 0.58
ATN1P54259 AC007688.1-201ENST00000475592 759 ntBASIC18.66■□□□□ 0.58
ATN1P54259 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.66■□□□□ 0.58
ATN1P54259 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.66■□□□□ 0.58
ATN1P54259 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.66■□□□□ 0.58
ATN1P54259 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATN1P54259 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms