Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.48■□□□□ 0.39
ATXN3P54252 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.48■□□□□ 0.39
ATXN3P54252 CRYGEP-201ENST00000412192 528 ntBASIC17.48■□□□□ 0.39
ATXN3P54252 CYMP-203ENST00000474680 1263 ntBASIC17.48■□□□□ 0.39
ATXN3P54252 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.48■□□□□ 0.39
ATXN3P54252 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.48■□□□□ 0.39
ATXN3P54252 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.48■□□□□ 0.39
ATXN3P54252 MIR4469-201ENST00000583919 79 ntBASIC17.48■□□□□ 0.39
ATXN3P54252 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.48■□□□□ 0.39
ATXN3P54252 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ATXN3P54252 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATXN3P54252 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 LINC01126-201ENST00000623515 1646 ntBASIC17.47■□□□□ 0.39
ATXN3P54252 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATXN3P54252 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.47■□□□□ 0.39
ATXN3P54252 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 AC254562.1-201ENST00000417586 456 ntBASIC17.47■□□□□ 0.39
ATXN3P54252 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.47■□□□□ 0.39
ATXN3P54252 AC007967.3-201ENST00000434308 558 ntBASIC17.47■□□□□ 0.39
ATXN3P54252 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.47■□□□□ 0.39
ATXN3P54252 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ATXN3P54252 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ATXN3P54252 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATXN3P54252 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATXN3P54252 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATXN3P54252 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ATXN3P54252 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 AC018695.7-201ENST00000624587 2492 ntBASIC17.46■□□□□ 0.39
ATXN3P54252 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATXN3P54252 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.46■□□□□ 0.39
ATXN3P54252 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ATXN3P54252 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.46■□□□□ 0.39
ATXN3P54252 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.46■□□□□ 0.39
ATXN3P54252 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATXN3P54252 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.46■□□□□ 0.39
ATXN3P54252 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.46■□□□□ 0.39
ATXN3P54252 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ATXN3P54252 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.46■□□□□ 0.39
ATXN3P54252 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.46■□□□□ 0.39
ATXN3P54252 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.46■□□□□ 0.39
ATXN3P54252 RFPL4AP1-201ENST00000530883 850 ntBASIC17.46■□□□□ 0.39
ATXN3P54252 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.46■□□□□ 0.39
ATXN3P54252 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.46■□□□□ 0.39
ATXN3P54252 MIR4751-201ENST00000578027 74 ntBASIC17.46■□□□□ 0.39
ATXN3P54252 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms