Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TM4SF4P48230 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TM4SF4P48230 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.17■□□□□ 0.66
TM4SF4P48230 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF4P48230 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 ANKRD19P-201ENST00000338192 862 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.17■□□□□ 0.66
TM4SF4P48230 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF4P48230 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.17■□□□□ 0.66
TM4SF4P48230 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.17■□□□□ 0.66
TM4SF4P48230 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.17■□□□□ 0.66
TM4SF4P48230 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 AC104989.1-201ENST00000519711 778 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.17■□□□□ 0.66
TM4SF4P48230 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.17■□□□□ 0.66
TM4SF4P48230 AC023310.3-201ENST00000557027 670 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 AC100756.1-201ENST00000562736 682 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 AC138749.3-201ENST00000567691 622 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.17■□□□□ 0.66
TM4SF4P48230 AC008735.3-201ENST00000596646 500 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 AC116165.1-201ENST00000611806 668 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 AC068587.10-201ENST00000641210 219 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TM4SF4P48230 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.17■□□□□ 0.66
TM4SF4P48230 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TM4SF4P48230 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.17■□□□□ 0.66
TM4SF4P48230 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.17■□□□□ 0.66
TM4SF4P48230 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TM4SF4P48230 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.16■□□□□ 0.66
TM4SF4P48230 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
TM4SF4P48230 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.16■□□□□ 0.66
TM4SF4P48230 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.16■□□□□ 0.66
TM4SF4P48230 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.16■□□□□ 0.66
TM4SF4P48230 RNA5SP410-201ENST00000516285 106 ntBASIC19.16■□□□□ 0.66
TM4SF4P48230 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.16■□□□□ 0.66
TM4SF4P48230 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.16■□□□□ 0.66
TM4SF4P48230 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.16■□□□□ 0.66
TM4SF4P48230 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TM4SF4P48230 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF4P48230 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF4P48230 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 MIR1908-201ENST00000410394 80 ntBASIC19.15■□□□□ 0.66
TM4SF4P48230 BCYRN1-201ENST00000418539 200 ntBASIC19.15■□□□□ 0.66
TM4SF4P48230 AC098850.1-201ENST00000419919 790 ntBASIC19.15■□□□□ 0.66
TM4SF4P48230 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF4P48230 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 AL583810.1-201ENST00000553344 1045 ntBASIC19.15■□□□□ 0.66
TM4SF4P48230 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.15■□□□□ 0.66
TM4SF4P48230 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.15■□□□□ 0.66
TM4SF4P48230 AC004461.2-201ENST00000629517 803 ntBASIC19.15■□□□□ 0.66
TM4SF4P48230 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TM4SF4P48230 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 KRT8P49-201ENST00000604166 1432 ntBASIC19.15■□□□□ 0.66
TM4SF4P48230 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TM4SF4P48230 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TM4SF4P48230 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.15■□□□□ 0.66
TM4SF4P48230 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM4SF4P48230 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TM4SF4P48230 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
TM4SF4P48230 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TM4SF4P48230 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms