Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SHC1P29353 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.68■□□□□ 0.1
SHC1P29353 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHC1P29353 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.68■□□□□ 0.1
SHC1P29353 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
SHC1P29353 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 MRPL3P1-201ENST00000400109 1033 ntBASIC15.67■□□□□ 0.1
SHC1P29353 FAM197Y8-203ENST00000450145 560 ntBASIC15.67■□□□□ 0.1
SHC1P29353 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.67■□□□□ 0.1
SHC1P29353 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.67■□□□□ 0.1
SHC1P29353 AC025062.2-201ENST00000605477 670 ntBASIC15.67■□□□□ 0.1
SHC1P29353 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 CICP6-201ENST00000457191 2729 ntBASIC15.67■□□□□ 0.1
SHC1P29353 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.67■□□□□ 0.1
SHC1P29353 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.67■□□□□ 0.1
SHC1P29353 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHC1P29353 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SHC1P29353 AL135999.2-201ENST00000622438 1686 ntBASIC15.67■□□□□ 0.1
SHC1P29353 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHC1P29353 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.66■□□□□ 0.1
SHC1P29353 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SHC1P29353 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 HNRNPDP1-201ENST00000439535 754 ntBASIC15.66■□□□□ 0.1
SHC1P29353 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.66■□□□□ 0.1
SHC1P29353 SIGLEC30P-201ENST00000455569 941 ntBASIC15.66■□□□□ 0.1
SHC1P29353 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SHC1P29353 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 AL160237.2-201ENST00000556165 472 ntBASIC15.66■□□□□ 0.1
SHC1P29353 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.66■□□□□ 0.1
SHC1P29353 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 MTDHP4-201ENST00000600287 670 ntBASIC15.66■□□□□ 0.1
SHC1P29353 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.66■□□□□ 0.1
SHC1P29353 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SHC1P29353 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.66■□□□□ 0.1
SHC1P29353 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.66■□□□□ 0.1
SHC1P29353 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHC1P29353 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHC1P29353 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHC1P29353 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms