Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.21■□□□□ 0.35
VCLP18206 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.21■□□□□ 0.35
VCLP18206 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
VCLP18206 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.21■□□□□ 0.35
VCLP18206 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VCLP18206 KRT18P67-201ENST00000432816 1264 ntBASIC17.21■□□□□ 0.35
VCLP18206 STK19B-204ENST00000512515 211 ntBASIC17.21■□□□□ 0.35
VCLP18206 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.21■□□□□ 0.35
VCLP18206 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.21■□□□□ 0.35
VCLP18206 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.21■□□□□ 0.35
VCLP18206 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.21■□□□□ 0.35
VCLP18206 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.21■□□□□ 0.35
VCLP18206 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.21■□□□□ 0.35
VCLP18206 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 LYSMD4-203ENST00000378904 2122 ntBASIC17.21■□□□□ 0.35
VCLP18206 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
VCLP18206 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCLP18206 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VCLP18206 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VCLP18206 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
VCLP18206 SIGLEC16-201ENST00000599858 1437 ntBASIC17.21■□□□□ 0.34
VCLP18206 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
VCLP18206 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VCLP18206 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
VCLP18206 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.2■□□□□ 0.34
VCLP18206 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
VCLP18206 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.2■□□□□ 0.34
VCLP18206 SPDYE21P-201ENST00000413323 827 ntBASIC17.2■□□□□ 0.34
VCLP18206 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
VCLP18206 SIGLEC30P-201ENST00000455569 941 ntBASIC17.2■□□□□ 0.34
VCLP18206 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.2■□□□□ 0.34
VCLP18206 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.2■□□□□ 0.34
VCLP18206 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.2■□□□□ 0.34
VCLP18206 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.2■□□□□ 0.34
VCLP18206 STK25P1-201ENST00000585406 838 ntBASIC17.2■□□□□ 0.34
VCLP18206 AC073592.4-201ENST00000623827 446 ntBASIC17.2■□□□□ 0.34
VCLP18206 AL022326.1-202ENST00000641533 845 ntBASIC17.2■□□□□ 0.34
VCLP18206 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.2■□□□□ 0.34
VCLP18206 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.2■□□□□ 0.34
VCLP18206 AL513477.1-201ENST00000602865 2407 ntBASIC17.2■□□□□ 0.34
VCLP18206 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCLP18206 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
VCLP18206 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.2■□□□□ 0.34
VCLP18206 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.19■□□□□ 0.34
VCLP18206 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VCLP18206 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.19■□□□□ 0.34
VCLP18206 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
VCLP18206 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.19■□□□□ 0.34
VCLP18206 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.19■□□□□ 0.34
VCLP18206 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.19■□□□□ 0.34
VCLP18206 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
VCLP18206 AC093909.1-201ENST00000504731 1122 ntBASIC17.19■□□□□ 0.34
VCLP18206 RNPS1P1-201ENST00000507437 918 ntBASIC17.19■□□□□ 0.34
VCLP18206 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.19■□□□□ 0.34
VCLP18206 NKAPP1-205ENST00000585790 367 ntBASIC17.19■□□□□ 0.34
VCLP18206 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.19■□□□□ 0.34
VCLP18206 AL773604.1-201ENST00000617417 272 ntBASIC17.19■□□□□ 0.34
VCLP18206 TP73-AS1-207ENST00000624167 988 ntBASIC17.19■□□□□ 0.34
VCLP18206 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.19■□□□□ 0.34
VCLP18206 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VCLP18206 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms