Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 AC008267.7-201ENST00000624570 1194 ntBASIC20.81■□□□□ 0.92
CSF1RP07333 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSF1RP07333 SNX33P1-201ENST00000592116 1762 ntBASIC20.81■□□□□ 0.92
CSF1RP07333 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CSF1RP07333 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.81■□□□□ 0.92
CSF1RP07333 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1RP07333 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSF1RP07333 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CSF1RP07333 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1RP07333 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1RP07333 KRT18P32-201ENST00000424695 1287 ntBASIC20.8■□□□□ 0.92
CSF1RP07333 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 AL138918.1-201ENST00000568306 659 ntBASIC20.8■□□□□ 0.92
CSF1RP07333 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.8■□□□□ 0.92
CSF1RP07333 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CSF1RP07333 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CSF1RP07333 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.8■□□□□ 0.92
CSF1RP07333 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.8■□□□□ 0.92
CSF1RP07333 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CSF1RP07333 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.8■□□□□ 0.92
CSF1RP07333 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 AC139713.2-201ENST00000641328 2723 ntBASIC20.8■□□□□ 0.92
CSF1RP07333 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSF1RP07333 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CSF1RP07333 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.79■□□□□ 0.92
CSF1RP07333 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CSF1RP07333 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
CSF1RP07333 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.79■□□□□ 0.92
CSF1RP07333 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CSF1RP07333 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.79■□□□□ 0.92
CSF1RP07333 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.79■□□□□ 0.92
CSF1RP07333 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.79■□□□□ 0.92
CSF1RP07333 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.79■□□□□ 0.92
CSF1RP07333 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 AC021097.1-201ENST00000607902 574 ntBASIC20.79■□□□□ 0.92
CSF1RP07333 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.79■□□□□ 0.92
CSF1RP07333 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.79■□□□□ 0.92
CSF1RP07333 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CSF1RP07333 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSF1RP07333 AL023806.1-201ENST00000603994 1649 ntBASIC20.78■□□□□ 0.92
CSF1RP07333 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CSF1RP07333 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.78■□□□□ 0.92
CSF1RP07333 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.78■□□□□ 0.92
CSF1RP07333 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
CSF1RP07333 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
CSF1RP07333 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CSF1RP07333 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.78■□□□□ 0.92
CSF1RP07333 AP000842.3-202ENST00000569238 1080 ntBASIC20.78■□□□□ 0.92
CSF1RP07333 AC027307.2-201ENST00000591252 911 ntBASIC20.78■□□□□ 0.92
CSF1RP07333 Z92544.3-201ENST00000624747 417 ntBASIC20.78■□□□□ 0.92
CSF1RP07333 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.78■□□□□ 0.92
CSF1RP07333 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CSF1RP07333 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.78■□□□□ 0.92
CSF1RP07333 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CSF1RP07333 PCDHB17P-201ENST00000539533 2393 ntBASIC20.78■□□□□ 0.92
CSF1RP07333 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSF1RP07333 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1RP07333 AL671710.1-201ENST00000610245 2349 ntBASIC20.77■□□□□ 0.92
CSF1RP07333 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.77■□□□□ 0.92
CSF1RP07333 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1RP07333 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CSF1RP07333 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1RP07333 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.77■□□□□ 0.92
CSF1RP07333 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSF1RP07333 MIR770-201ENST00000390219 98 ntBASIC20.77■□□□□ 0.92
CSF1RP07333 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.77■□□□□ 0.92
CSF1RP07333 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.77■□□□□ 0.92
CSF1RP07333 RBPMS2P1-201ENST00000437762 623 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms