Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC084121.3-201ENST00000641716 218 ntBASIC17■□□□□ 0.31
CAPNS1P04632 AC105233.6-201ENST00000642093 218 ntBASIC17■□□□□ 0.31
CAPNS1P04632 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CAPNS1P04632 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPNS1P04632 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CAPNS1P04632 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 AC063926.2-201ENST00000623766 1308 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPNS1P04632 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CAPNS1P04632 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CAPNS1P04632 HTR7P1-202ENST00000624664 4411 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.99■□□□□ 0.31
CAPNS1P04632 PRSS29P-201ENST00000440800 595 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.99■□□□□ 0.31
CAPNS1P04632 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.99■□□□□ 0.31
CAPNS1P04632 AC190387.1-201ENST00000551683 408 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 AL031432.2-201ENST00000566714 459 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 AL928711.1-201ENST00000570165 459 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 AC005593.1-201ENST00000624894 515 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CAPNS1P04632 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CAPNS1P04632 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.99■□□□□ 0.31
CAPNS1P04632 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 DOC2GP-204ENST00000639052 2548 ntBASIC16.99■□□□□ 0.31
CAPNS1P04632 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CAPNS1P04632 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CAPNS1P04632 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 AC097374.2-201ENST00000618617 1306 ntBASIC16.98■□□□□ 0.31
CAPNS1P04632 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPNS1P04632 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPNS1P04632 TSEN15P1-201ENST00000423257 515 ntBASIC16.98■□□□□ 0.31
CAPNS1P04632 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.98■□□□□ 0.31
CAPNS1P04632 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 CEND1P1-201ENST00000451006 455 ntBASIC16.98■□□□□ 0.31
CAPNS1P04632 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.98■□□□□ 0.31
CAPNS1P04632 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.98■□□□□ 0.31
CAPNS1P04632 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CAPNS1P04632 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.98■□□□□ 0.31
CAPNS1P04632 AL513190.1-201ENST00000621254 727 ntBASIC16.98■□□□□ 0.31
CAPNS1P04632 AL035252.4-201ENST00000624174 288 ntBASIC16.98■□□□□ 0.31
CAPNS1P04632 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CAPNS1P04632 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CAPNS1P04632 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPNS1P04632 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms