Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.61■□□□□ 0.57
VTNP04004 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VTNP04004 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.61■□□□□ 0.57
VTNP04004 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.61■□□□□ 0.57
VTNP04004 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VTNP04004 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTNP04004 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
VTNP04004 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.6■□□□□ 0.57
VTNP04004 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTNP04004 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.6■□□□□ 0.57
VTNP04004 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTNP04004 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.6■□□□□ 0.57
VTNP04004 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.6■□□□□ 0.57
VTNP04004 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.6■□□□□ 0.57
VTNP04004 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.6■□□□□ 0.57
VTNP04004 SPDYE11-202ENST00000450699 704 ntBASIC18.6■□□□□ 0.57
VTNP04004 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.6■□□□□ 0.57
VTNP04004 CYMP-203ENST00000474680 1263 ntBASIC18.6■□□□□ 0.57
VTNP04004 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.6■□□□□ 0.57
VTNP04004 AC093520.2-201ENST00000561830 333 ntBASIC18.6■□□□□ 0.57
VTNP04004 SPDYE9P-201ENST00000570642 692 ntBASIC18.6■□□□□ 0.57
VTNP04004 AL009183.1-201ENST00000603760 355 ntBASIC18.6■□□□□ 0.57
VTNP04004 SPDYE10P-202ENST00000612005 668 ntBASIC18.6■□□□□ 0.57
VTNP04004 SPDYE8P-202ENST00000612377 668 ntBASIC18.6■□□□□ 0.57
VTNP04004 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTNP04004 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
VTNP04004 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VTNP04004 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VTNP04004 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VTNP04004 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.59■□□□□ 0.57
VTNP04004 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.59■□□□□ 0.57
VTNP04004 TFAMP1-201ENST00000412727 736 ntBASIC18.59■□□□□ 0.57
VTNP04004 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 AC023141.5-201ENST00000458585 616 ntBASIC18.59■□□□□ 0.57
VTNP04004 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.59■□□□□ 0.57
VTNP04004 AL135744.1-201ENST00000565098 629 ntBASIC18.59■□□□□ 0.57
VTNP04004 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.59■□□□□ 0.57
VTNP04004 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.59■□□□□ 0.57
VTNP04004 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.59■□□□□ 0.57
VTNP04004 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.59■□□□□ 0.57
VTNP04004 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.59■□□□□ 0.57
VTNP04004 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTNP04004 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
VTNP04004 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.58■□□□□ 0.57
VTNP04004 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.58■□□□□ 0.57
VTNP04004 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VTNP04004 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.58■□□□□ 0.56
VTNP04004 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VTNP04004 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.58■□□□□ 0.56
VTNP04004 HCG4-201ENST00000418983 998 ntBASIC18.58■□□□□ 0.56
VTNP04004 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms