Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL1A1P02452 AF228730.6-201ENST00000641497 218 ntBASIC20.34■□□□□ 0.85
COL1A1P02452 AC084121.4-201ENST00000641598 221 ntBASIC20.34■□□□□ 0.85
COL1A1P02452 AC084121.3-201ENST00000641716 218 ntBASIC20.34■□□□□ 0.85
COL1A1P02452 AC105233.6-201ENST00000642093 218 ntBASIC20.34■□□□□ 0.85
COL1A1P02452 AF228730.8-201ENST00000642140 221 ntBASIC20.34■□□□□ 0.85
COL1A1P02452 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL1A1P02452 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.34■□□□□ 0.85
COL1A1P02452 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL1A1P02452 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A1P02452 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.34■□□□□ 0.85
COL1A1P02452 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.33■□□□□ 0.85
COL1A1P02452 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
COL1A1P02452 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.33■□□□□ 0.85
COL1A1P02452 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.33■□□□□ 0.85
COL1A1P02452 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.33■□□□□ 0.85
COL1A1P02452 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.33■□□□□ 0.85
COL1A1P02452 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.33■□□□□ 0.85
COL1A1P02452 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A1P02452 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.33■□□□□ 0.84
COL1A1P02452 SNX33P1-201ENST00000592116 1762 ntBASIC20.33■□□□□ 0.84
COL1A1P02452 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A1P02452 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A1P02452 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A1P02452 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.33■□□□□ 0.84
COL1A1P02452 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL1A1P02452 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A1P02452 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A1P02452 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.32■□□□□ 0.84
COL1A1P02452 AC055876.3-201ENST00000431496 288 ntBASIC20.32■□□□□ 0.84
COL1A1P02452 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.32■□□□□ 0.84
COL1A1P02452 FAM207CP-201ENST00000443486 507 ntBASIC20.32■□□□□ 0.84
COL1A1P02452 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.32■□□□□ 0.84
COL1A1P02452 AC012645.4-201ENST00000610691 1061 ntBASIC20.32■□□□□ 0.84
COL1A1P02452 AC138649.4-201ENST00000612222 287 ntBASIC20.32■□□□□ 0.84
COL1A1P02452 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.32■□□□□ 0.84
COL1A1P02452 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.32■□□□□ 0.84
COL1A1P02452 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COL1A1P02452 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A1P02452 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COL1A1P02452 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL1A1P02452 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
COL1A1P02452 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.31■□□□□ 0.84
COL1A1P02452 AC107890.1-201ENST00000422478 521 ntBASIC20.31■□□□□ 0.84
COL1A1P02452 AC125807.1-201ENST00000483097 614 ntBASIC20.31■□□□□ 0.84
COL1A1P02452 TERF1P3-201ENST00000505638 1227 ntBASIC20.31■□□□□ 0.84
COL1A1P02452 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.31■□□□□ 0.84
COL1A1P02452 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.31■□□□□ 0.84
COL1A1P02452 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 AL035252.4-201ENST00000624174 288 ntBASIC20.31■□□□□ 0.84
COL1A1P02452 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.31■□□□□ 0.84
COL1A1P02452 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.31■□□□□ 0.84
COL1A1P02452 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.31■□□□□ 0.84
COL1A1P02452 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 AL021920.2-201ENST00000624828 1351 ntBASIC20.31■□□□□ 0.84
COL1A1P02452 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.31■□□□□ 0.84
COL1A1P02452 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COL1A1P02452 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.31■□□□□ 0.84
COL1A1P02452 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.31■□□□□ 0.84
COL1A1P02452 AC060834.1-201ENST00000443027 2032 ntBASIC20.31■□□□□ 0.84
COL1A1P02452 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.31■□□□□ 0.84
COL1A1P02452 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL1A1P02452 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.3■□□□□ 0.84
COL1A1P02452 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms