Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-CO1P00395 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-CO1P00395 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MT-CO1P00395 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MT-CO1P00395 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
MT-CO1P00395 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
MT-CO1P00395 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-CO1P00395 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MT-CO1P00395 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MT-CO1P00395 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-CO1P00395 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-CO1P00395 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 SLC25A1P3-201ENST00000395415 828 ntBASIC17.49■□□□□ 0.39
MT-CO1P00395 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-CO1P00395 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.49■□□□□ 0.39
MT-CO1P00395 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 KRT18P3-201ENST00000451602 1288 ntBASIC17.49■□□□□ 0.39
MT-CO1P00395 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
MT-CO1P00395 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.49■□□□□ 0.39
MT-CO1P00395 PGAM5P1-201ENST00000518923 814 ntBASIC17.49■□□□□ 0.39
MT-CO1P00395 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-CO1P00395 OR7E47P-204ENST00000575924 449 ntBASIC17.49■□□□□ 0.39
MT-CO1P00395 FAM197Y3-203ENST00000618346 717 ntBASIC17.49■□□□□ 0.39
MT-CO1P00395 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-CO1P00395 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.49■□□□□ 0.39
MT-CO1P00395 PRORSD1P-202ENST00000563365 2154 ntBASIC17.49■□□□□ 0.39
MT-CO1P00395 OR6D1P-203ENST00000641209 4860 ntBASIC17.49■□□□□ 0.39
MT-CO1P00395 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MT-CO1P00395 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
MT-CO1P00395 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MT-CO1P00395 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
MT-CO1P00395 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MT-CO1P00395 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-CO1P00395 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AC022211.2-201ENST00000585075 2527 ntBASIC17.48■□□□□ 0.39
MT-CO1P00395 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MT-CO1P00395 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-CO1P00395 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-CO1P00395 MIR4751-201ENST00000578027 74 ntBASIC17.48■□□□□ 0.39
MT-CO1P00395 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-CO1P00395 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.48■□□□□ 0.39
MT-CO1P00395 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-CO1P00395 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-CO1P00395 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MT-CO1P00395 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-CO1P00395 PMS2P7-201ENST00000506558 1336 ntBASIC17.47■□□□□ 0.39
MT-CO1P00395 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-CO1P00395 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
MT-CO1P00395 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MT-CO1P00395 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-CO1P00395 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-CO1P00395 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-CO1P00395 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-CO1P00395 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MT-CO1P00395 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
MT-CO1P00395 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-CO1P00395 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms