Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.59■□□□□ 0.73
MBD3O95983 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.59■□□□□ 0.73
MBD3O95983 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 ZNF444P1-201ENST00000559497 298 ntBASIC19.59■□□□□ 0.73
MBD3O95983 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.59■□□□□ 0.73
MBD3O95983 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.59■□□□□ 0.73
MBD3O95983 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
MBD3O95983 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MBD3O95983 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.59■□□□□ 0.73
MBD3O95983 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3O95983 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3O95983 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.58■□□□□ 0.73
MBD3O95983 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
MBD3O95983 AC104640.1-201ENST00000562617 2109 ntBASIC19.58■□□□□ 0.73
MBD3O95983 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3O95983 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3O95983 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.58■□□□□ 0.73
MBD3O95983 KRT17P2-201ENST00000300992 1314 ntBASIC19.58■□□□□ 0.73
MBD3O95983 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.58■□□□□ 0.73
MBD3O95983 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.58■□□□□ 0.73
MBD3O95983 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3O95983 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3O95983 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
MBD3O95983 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
MBD3O95983 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MBD3O95983 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.58■□□□□ 0.72
MBD3O95983 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.58■□□□□ 0.72
MBD3O95983 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.58■□□□□ 0.72
MBD3O95983 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.58■□□□□ 0.72
MBD3O95983 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.58■□□□□ 0.72
MBD3O95983 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MBD3O95983 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.58■□□□□ 0.72
MBD3O95983 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
MBD3O95983 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MBD3O95983 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
MBD3O95983 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MBD3O95983 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 TSPY20P-201ENST00000450910 630 ntBASIC19.57■□□□□ 0.72
MBD3O95983 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3O95983 AL023973.1-201ENST00000624619 620 ntBASIC19.57■□□□□ 0.72
MBD3O95983 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3O95983 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
MBD3O95983 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3O95983 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MBD3O95983 KRT8P10-201ENST00000450021 1447 ntBASIC19.57■□□□□ 0.72
MBD3O95983 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3O95983 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.57■□□□□ 0.72
MBD3O95983 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3O95983 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.57■□□□□ 0.72
MBD3O95983 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms