Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VAPBO95292 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.16■□□□□ 0.34
VAPBO95292 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 PCDHB17P-201ENST00000539533 2393 ntBASIC17.16■□□□□ 0.34
VAPBO95292 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
VAPBO95292 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VAPBO95292 AC079328.2-201ENST00000561241 3354 ntBASIC17.15■□□□□ 0.34
VAPBO95292 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 PRYP5-201ENST00000451909 266 ntBASIC17.15■□□□□ 0.34
VAPBO95292 KRT18P31-201ENST00000506277 1292 ntBASIC17.15■□□□□ 0.34
VAPBO95292 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.15■□□□□ 0.34
VAPBO95292 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
VAPBO95292 AL121772.3-201ENST00000610840 674 ntBASIC17.15■□□□□ 0.34
VAPBO95292 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.15■□□□□ 0.34
VAPBO95292 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VAPBO95292 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
VAPBO95292 AC092171.3-201ENST00000610122 2651 ntBASIC17.14■□□□□ 0.34
VAPBO95292 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
VAPBO95292 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
VAPBO95292 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.14■□□□□ 0.33
VAPBO95292 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
VAPBO95292 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.14■□□□□ 0.33
VAPBO95292 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VAPBO95292 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.14■□□□□ 0.33
VAPBO95292 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VAPBO95292 RBM17P3-201ENST00000417687 1192 ntBASIC17.14■□□□□ 0.33
VAPBO95292 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.14■□□□□ 0.33
VAPBO95292 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.14■□□□□ 0.33
VAPBO95292 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.14■□□□□ 0.33
VAPBO95292 NKAPP1-205ENST00000585790 367 ntBASIC17.14■□□□□ 0.33
VAPBO95292 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.14■□□□□ 0.33
VAPBO95292 MTDHP3-201ENST00000594186 672 ntBASIC17.14■□□□□ 0.33
VAPBO95292 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.14■□□□□ 0.33
VAPBO95292 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
VAPBO95292 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 AL139384.1-201ENST00000612143 3047 ntBASIC17.14■□□□□ 0.33
VAPBO95292 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
VAPBO95292 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
VAPBO95292 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
VAPBO95292 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.13■□□□□ 0.33
VAPBO95292 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.13■□□□□ 0.33
VAPBO95292 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
VAPBO95292 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.13■□□□□ 0.33
VAPBO95292 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
VAPBO95292 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.13■□□□□ 0.33
VAPBO95292 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VAPBO95292 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.13■□□□□ 0.33
VAPBO95292 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAPBO95292 PCDHB19P-201ENST00000570871 2371 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms