Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RNF40O75150 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 AC243591.1-201ENST00000452967 1364 ntBASIC18.47■□□□□ 0.55
RNF40O75150 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF40O75150 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF40O75150 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF40O75150 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF40O75150 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF40O75150 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF40O75150 AC139530.3-201ENST00000620344 690 ntBASIC18.47■□□□□ 0.55
RNF40O75150 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RNF40O75150 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF40O75150 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF40O75150 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF40O75150 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RNF40O75150 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RNF40O75150 AL356309.3-201ENST00000624132 1934 ntBASIC18.47■□□□□ 0.55
RNF40O75150 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF40O75150 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 TP73-AS1-210ENST00000637775 1455 ntBASIC18.46■□□□□ 0.55
RNF40O75150 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF40O75150 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF40O75150 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF40O75150 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 AC018712.1-201ENST00000455767 687 ntBASIC18.46■□□□□ 0.55
RNF40O75150 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 KRT18P58-201ENST00000527480 1120 ntBASIC18.46■□□□□ 0.55
RNF40O75150 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF40O75150 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF40O75150 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF40O75150 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF40O75150 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF40O75150 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF40O75150 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.46■□□□□ 0.54
RNF40O75150 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF40O75150 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF40O75150 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF40O75150 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF40O75150 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF40O75150 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF40O75150 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF40O75150 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.45■□□□□ 0.54
RNF40O75150 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF40O75150 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
RNF40O75150 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF40O75150 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF40O75150 AC073648.2-201ENST00000510116 352 ntBASIC18.45■□□□□ 0.54
RNF40O75150 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF40O75150 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF40O75150 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF40O75150 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms