Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL162727.3-201ENST00000635661 2787 ntBASIC16.01■□□□□ 0.15
HCN1O60741 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HCN1O60741 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16■□□□□ 0.15
HCN1O60741 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HCN1O60741 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16■□□□□ 0.15
HCN1O60741 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16■□□□□ 0.15
HCN1O60741 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
HCN1O60741 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 COX5BP2-201ENST00000392354 334 ntBASIC16■□□□□ 0.15
HCN1O60741 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16■□□□□ 0.15
HCN1O60741 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16■□□□□ 0.15
HCN1O60741 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
HCN1O60741 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16■□□□□ 0.15
HCN1O60741 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16■□□□□ 0.15
HCN1O60741 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16■□□□□ 0.15
HCN1O60741 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
HCN1O60741 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCN1O60741 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16■□□□□ 0.15
HCN1O60741 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.99■□□□□ 0.15
HCN1O60741 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HCN1O60741 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HCN1O60741 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HCN1O60741 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 AC005104.2-201ENST00000427818 678 ntBASIC15.99■□□□□ 0.15
HCN1O60741 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.99■□□□□ 0.15
HCN1O60741 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
HCN1O60741 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.99■□□□□ 0.15
HCN1O60741 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 AC010460.3-201ENST00000511359 1579 ntBASIC15.99■□□□□ 0.15
HCN1O60741 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCN1O60741 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.99■□□□□ 0.15
HCN1O60741 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms