Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.56■□□□□ 0.4
TSPAN3O60637 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AC023141.13-201ENST00000604991 943 ntBASIC17.56■□□□□ 0.4
TSPAN3O60637 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 ACTL9-202ENST00000612068 1252 ntBASIC17.56■□□□□ 0.4
TSPAN3O60637 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AC007064.4-201ENST00000637740 555 ntBASIC17.56■□□□□ 0.4
TSPAN3O60637 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
TSPAN3O60637 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 AC012313.1-201ENST00000593393 3059 ntBASIC17.56■□□□□ 0.4
TSPAN3O60637 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TSPAN3O60637 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TSPAN3O60637 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
TSPAN3O60637 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.55■□□□□ 0.4
TSPAN3O60637 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 MCCD1P2-201ENST00000423228 335 ntBASIC17.55■□□□□ 0.4
TSPAN3O60637 RPS8P6-201ENST00000426177 609 ntBASIC17.55■□□□□ 0.4
TSPAN3O60637 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 ALG1L5P-201ENST00000482043 771 ntBASIC17.55■□□□□ 0.4
TSPAN3O60637 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TSPAN3O60637 AC107918.2-201ENST00000530817 355 ntBASIC17.55■□□□□ 0.4
TSPAN3O60637 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.55■□□□□ 0.4
TSPAN3O60637 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.55■□□□□ 0.4
TSPAN3O60637 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 AL078644.1-201ENST00000609881 752 ntBASIC17.55■□□□□ 0.4
TSPAN3O60637 AL691403.2-201ENST00000618460 490 ntBASIC17.55■□□□□ 0.4
TSPAN3O60637 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.55■□□□□ 0.4
TSPAN3O60637 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TSPAN3O60637 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TSPAN3O60637 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TSPAN3O60637 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TSPAN3O60637 LETM1P2-201ENST00000597330 2178 ntBASIC17.55■□□□□ 0.4
TSPAN3O60637 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.54■□□□□ 0.4
TSPAN3O60637 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 AC129492.6-201ENST00000611383 1305 ntBASIC17.54■□□□□ 0.4
TSPAN3O60637 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.54■□□□□ 0.4
TSPAN3O60637 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN3O60637 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TSPAN3O60637 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TSPAN3O60637 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.54■□□□□ 0.4
TSPAN3O60637 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN3O60637 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN3O60637 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.54■□□□□ 0.4
TSPAN3O60637 PDPK2P-202ENST00000562415 1191 ntBASIC17.54■□□□□ 0.4
TSPAN3O60637 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.54■□□□□ 0.4
TSPAN3O60637 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TSPAN3O60637 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.54■□□□□ 0.4
TSPAN3O60637 LTB4R2-202ENST00000528054 3092 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms