Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2AO43633 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHMP2AO43633 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHMP2AO43633 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2AO43633 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2AO43633 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2AO43633 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2AO43633 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 FRMD8P1-201ENST00000440433 1524 ntBASIC19.16■□□□□ 0.66
CHMP2AO43633 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2AO43633 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2AO43633 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP2AO43633 AC092865.5-201ENST00000545435 363 ntBASIC19.16■□□□□ 0.66
CHMP2AO43633 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.16■□□□□ 0.66
CHMP2AO43633 AC023511.2-201ENST00000618803 211 ntBASIC19.16■□□□□ 0.66
CHMP2AO43633 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHMP2AO43633 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP2AO43633 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 OR6D1P-203ENST00000641209 4860 ntBASIC19.16■□□□□ 0.66
CHMP2AO43633 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHMP2AO43633 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2AO43633 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHMP2AO43633 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CHMP2AO43633 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP2AO43633 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP2AO43633 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP2AO43633 CXCL1P1-201ENST00000502804 216 ntBASIC19.15■□□□□ 0.66
CHMP2AO43633 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 AL513190.1-201ENST00000621254 727 ntBASIC19.15■□□□□ 0.66
CHMP2AO43633 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP2AO43633 AC092865.6-201ENST00000642101 219 ntBASIC19.15■□□□□ 0.66
CHMP2AO43633 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP2AO43633 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.15■□□□□ 0.66
CHMP2AO43633 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP2AO43633 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP2AO43633 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2AO43633 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.14■□□□□ 0.66
CHMP2AO43633 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.14■□□□□ 0.66
CHMP2AO43633 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.14■□□□□ 0.66
CHMP2AO43633 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP2AO43633 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.14■□□□□ 0.66
CHMP2AO43633 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
CHMP2AO43633 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP2AO43633 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP2AO43633 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP2AO43633 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.66
CHMP2AO43633 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CHMP2AO43633 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP2AO43633 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2AO43633 AC092068.3-201ENST00000587894 2016 ntBASIC19.14■□□□□ 0.65
CHMP2AO43633 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHMP2AO43633 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP2AO43633 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2AO43633 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2AO43633 AC107918.2-201ENST00000530817 355 ntBASIC19.14■□□□□ 0.65
CHMP2AO43633 AC040169.1-201ENST00000565382 521 ntBASIC19.14■□□□□ 0.65
CHMP2AO43633 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms