Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 AC026471.1-201ENST00000564629 3026 ntBASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPIPA3F8WFD2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 AC016396.2-201ENST00000562575 1417 ntBASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
NPIPA3F8WFD2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 AL023806.1-201ENST00000603994 1649 ntBASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 AC211486.1-202ENST00000416371 468 ntBASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 MCCD1P2-201ENST00000423228 335 ntBASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 AC211476.1-201ENST00000503899 468 ntBASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPIPA3F8WFD2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 LETM1P2-201ENST00000597330 2178 ntBASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 CROCCP2-202ENST00000412962 2773 ntBASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NPIPA3F8WFD2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms