Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAI2Q9Y5P3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 GPX1P2-201ENST00000429271 606 ntBASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 PAWRP1-201ENST00000451083 565 ntBASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 IGHV3-65-201ENST00000523210 341 ntBASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 AC008667.4-201ENST00000607370 168 ntBASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 AC027601.4-201ENST00000611259 610 ntBASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAI2Q9Y5P3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 AC104109.2-201ENST00000602919 1418 ntBASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.27■□□□□ 0.35
RAI2Q9Y5P3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 IGHV3-22-201ENST00000520721 359 ntBASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 AC124947.2-201ENST00000547118 1133 ntBASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAI2Q9Y5P3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 AC060834.1-201ENST00000443027 2032 ntBASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 RNA5SP415-201ENST00000517246 115 ntBASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 UNC93B6-202ENST00000528242 690 ntBASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 GGTLC5P-201ENST00000617623 998 ntBASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAI2Q9Y5P3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms