Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 AC004835.2-201ENST00000603762 682 ntBASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 AC092902.6-201ENST00000641783 218 ntBASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 AL645728.2-201ENST00000641974 660 ntBASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTDP1Q9Y5B0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.68■□□□□ 0.74
CTDP1Q9Y5B0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 AC092919.2-201ENST00000623631 1645 ntBASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.67■□□□□ 0.74
CTDP1Q9Y5B0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 AC004449.1-201ENST00000564240 433 ntBASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms